BACKGROUND Mycolicibacterium fortuitum is an opportunistic pathogen associated with human and animal infection worldwide. Studies concerning this species are mainly represented by case reports, some of them addressing drug susceptibility with a focus on a specific geographic region, so there is a gap in relation to the global epidemiological scenario. OBJECTIVES We aimed determine the global epidemiological scenario of M. fortuitum and analyse its traits associated with pathogenicity. METHODS Based on publicly available genomes of M. fortuitum and a genome from Brazil (this study), we performed a genomic epidemiology analysis and in silico and in vitro characterisation of the resistome and virulome of this species. FINDINGS Three main clusters were defined, one including isolates from the environment, human and animal infections recovered over nearly a century. An apparent intrinsic resistome comprises mechanisms associated with macrolides, beta-lactams, aminoglycosides and antitubercular drugs such as rifampin. Besides, the virulome presented Type VII secretion systems (T7SS), including ESX-1, ESX-3, ESX-4 and ESX-4-bis, some of which play a role on the virulence of Mycobacteriaceae species. MAIN CONCLUSIONS Here, M. fortuitum was revealed as a reservoir of an expressive intrinsic resistome, as well as a virulome that may contribute to its success as a global opportunist pathogen.

Resumo Endoparasitoses estão associadas à morbidade em gatos. Este estudo objetivou investigar a ocorrência de endoparasitos em gatos de diversas faixas etárias, na cidade do Rio de Janeiro. As amostras passaram por exploração macroscópica à procura de proglotes de cestódeos e analisadas individualmente por centrífugo-flutuação. Assim, amostras fecais foram obtidas de gatos domiciliados (n = 57) e de abrigos (n = 336). Endoparasitos foram detectados em 50,64% das amostras fecais. Nos gatos domiciliados e de abrigos, 21,05% e 55,66% estavam infectados por endoparasitos, respectivamente. Ancylostoma spp. (25%) e Strongyloides spp. (25%) foram os helmintos mais prevalentes encontrados nas amostras de fezes dos gatos domiciliados, seguido por Toxocara spp. (16,67%), Dypilidium caninum (16,67%), Cystoisospora spp. (8,33%) e a associação de Uncinaria spp. e Ancylostoma spp. (8,33%). Entre os gatos dos abrigos, Ancylostoma spp. estavam presentes em 29,41% das amostras, seguidos por Cystoisospora spp. (26,20%), Toxocara spp. (16,58%) e as associações de parasitos Cystoisospora spp. + Toxocara spp. (8,02%), Ancylostoma spp. + Toxocara spp. (11,76%), Cystoisospora spp. + Ancylostoma spp (3,74%), Cystoisospora spp. + Toxocaraspp. + Ancylostoma spp. (3,21%) e Dipylidium caninum + Ancylostoma spp. (0,53%). Cystoisospora spp. foi o único protozoário encontrado. A presença de endoparasitos reforça a necessidade de cuidados veterinários preventivos e testes coproparasitológicos de rotina para evitar sua disseminação.

Abstract Endoparasitic infections are associated with morbidity in cats. This study aimed to investigate the occurrence of endoparasites among cats of different life stages in the city of Rio de Janeiro, Brazil. The samples were analyzed individually by macroscopic exploration for proglottids and centrifugal-flotation. Stool samples were obtained from household cats (n = 57) and shelter cats (n = 336). Endoparasites were detected in 50.64% of the samples. Among household and shelter cats, 21.05% and 55.66% were infected with endoparasites, respectively. In household cats, the most prevalent endoparasites were Ancylostoma spp. (in 25.0%) and Strongyloides spp. (in 25.0%), followed by Toxocara spp. (in 16.67%), Dipylidium caninum (in 16.67%), Cystoisospora spp. (in 8.33%), and Uncinaria spp. + Ancylostoma spp. (in 8.33%). In shelter cats, the most prevalent endoparasite was Ancylostoma spp. (in 29.41%), followed by Cystoisospora spp. (in 26.20%) and Toxocara spp. (in 16.58%), as well as Cystoisospora spp. + Toxocara spp. (in 8.02%); Ancylostoma spp. + Toxocara spp. (in 11.76%); Cystoisospora spp. + Ancylostoma spp. (in 3.74%); Cystoisospora spp. + Toxocara spp. + Ancylostoma spp. (in 3.21%); and Dipylidium caninum + Ancylostoma spp. (in 0.53%). Endoparasitic infections in cats underscore the need for preventive veterinary care and routine coproparasitologic tests.